Basic Information
Locus ID:
populus_peu34878
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 25136828 | 25141464 | + | populus_peu34878 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.32 | 118,223.05 Da | 53.81 | 68.04 | -0.69 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06410 | PB1_UP2 | 180 | 275 | 1.5932E-45 | - |
| CDD | cd13999 | STKc_MAP3K-like | 782 | 1039 | 5.90754E-108 | - |
| Pfam | PF00564 | PB1 domain | 192 | 277 | 4.7E-21 | IPR000270 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 777 | 1039 | 9.6E-62 | IPR001245 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 192 | 278 | 3.53E-21 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 765 | 1038 | 4.29E-72 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 769 | 863 | 3.6E-25 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 195 | 278 | 4.1E-14 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 864 | 1055 | 2.6E-51 | - |
| SMART | SM00666 | PB1_new | 191 | 278 | 1.8E-32 | IPR000270 |
| SMART | SM00220 | serkin_6 | 776 | 1043 | 7.8E-52 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 776 | 1046 | 40.046581 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 901 | 913 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 782 | 803 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 895 | 913 | 2.3E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 858 | 871 | 2.3E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 966 | 988 | 2.3E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1010 | 1032 | 2.3E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 311 | 339 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 65 | 95 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 78 | 95 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G04700.1 | PB1 domain-containing protein tyrosine kinase. | 0 |
| RefSeq | XP_011020692.1 | PREDICTED: uncharacterized protein LOC105122974 isoform X2 [Populus euphratica] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3N7EPY7 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_003G176100 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology