Basic Information
Locus ID:
populus_peu34828
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
f-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 24794879 | 24796370 | - | populus_peu34828 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.10 | 40,535.63 Da | 43.58 | 69.22 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01753 | MYND finger | 302 | 341 | 6.6E-8 | IPR002893 |
| SUPERFAMILY | SSF144232 | HIT/MYND zinc finger-like | 296 | 346 | 5.23E-10 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 59 | 120 | 5.76E-5 | IPR036047 |
| Gene3D | G3DSA:6.10.140.2220 | - | 290 | 345 | 1.8E-10 | - |
| ProSiteProfiles | PS50865 | Zinc finger MYND-type profile. | 299 | 341 | 11.239699 | IPR002893 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 348 | 374 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 352 | 374 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67340.1 | HCP-like superfamily protein with MYND-type zinc finger. | 0 |
| RefSeq | XP_011020756.1 | PREDICTED: F-box protein At1g67340-like [Populus euphratica] | 0 |
| Q9FYF9 | F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X8A9V3 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_012556 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology