Basic Information
Locus ID:
populus_peu34722
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 23865150 | 23866002 | - | populus_peu34722 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.96 | 28,962.61 Da | 64.51 | 100.97 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF48371 | ARM repeat | 14 | 230 | 1.65E-10 | IPR016024 |
| Gene3D | G3DSA:1.25.10.10 | - | 4 | 245 | 4.5E-9 | IPR011989 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_024446296.2 | U-box domain-containing protein 43 [Populus trichocarpa] | 0 |
| TrEMBL | A0A8X8DGB3 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_000527 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 1 | pistato.v30167590 |
| Arecaceae | Cocos nucifera | 1 | COCNU_15G006120 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103712369 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq07G0917 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl07G0960 |
| Salicaceae | Populus euphratica | 2 | populus_peu03893, populus_peu34722 |