Basic Information
Locus ID:
populus_peu34688
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 23622228 | 23626900 | - | populus_peu34688 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.31 | 106,820.39 Da | 35.54 | 104.18 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 343 | 401 | 2.6E-7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 248 | 270 | 0.052 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 74 | 2.2E-5 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 679 | 950 | 2.8E-45 | IPR001245 |
| SUPERFAMILY | SSF52047 | RNI-like | 83 | 404 | 6.91E-61 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 354 | 599 | 4.76E-43 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 672 | 950 | 2.83E-74 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 647 | 755 | 9.2E-23 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 332 | 604 | 1.5E-71 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 232 | 331 | 2.3E-27 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 231 | 2.0E-46 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 756 | 961 | 9.6E-60 | - |
| SMART | SM00369 | LRR_typ_2 | 342 | 366 | 37.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 197 | 220 | 140.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 678 | 927 | 1.6E-32 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 531 | 555 | 370.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 294 | 317 | 68.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 487 | 511 | 280.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 367 | 389 | 170.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 246 | 270 | 140.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 678 | 958 | 37.191513 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 800 | 812 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G20270.1 | Leucine-rich receptor-like protein kinase family protein. Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. | 0 |
| RefSeq | XP_011022287.1 | PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 [Populus euphratica] | 0 |
| O65440 | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 OS=Arabidopsis thaliana OX=3702 GN=BAM3 PE=1 SV=3 | 0 | |
| TrEMBL | B9GYR6 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_003G157300 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology