Basic Information
Locus ID:
populus_peu34666
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
cationic amino acid transporter
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 23411352 | 23413330 | + | populus_peu34666 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.27 | 56,678.59 Da | 28.85 | 103.08 | 0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13906 | C-terminus of AA_permease | 437 | 486 | 8.0E-17 | IPR029485 |
| Pfam | PF13520 | Amino acid permease | 174 | 323 | 5.3E-18 | IPR002293 |
| Gene3D | G3DSA:1.20.1740.10 | Amino acid/polyamine transporter I | 70 | 497 | 3.9E-56 | - |
| PIRSF | PIRSF006060 | AA_transporter | 137 | 339 | 1.7E-27 | - |
| PIRSF | PIRSF006060 | AA_transporter | 53 | 140 | 7.0E-14 | - |
| PIRSF | PIRSF006060 | AA_transporter | 366 | 508 | 1.7 | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G34960.1 | cationic amino acid transporter 5. Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Mediates efficient uptake of Lys, Arg and Glu in a yeast system. Localized to the plasma membrane. | 0 |
| RefSeq | XP_011022320.1 | PREDICTED: cationic amino acid transporter 5 [Populus euphratica] | 0 |
| O64759 | Cationic amino acid transporter 5 OS=Arabidopsis thaliana OX=3702 GN=CAT5 PE=1 SV=1 | 0 | |
| TrEMBL | B9GYF7 | AA_permease_C domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_003G154600 PE=4 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology