Basic Information
Locus ID:
populus_peu34609
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 22946701 | 22948652 | + | populus_peu34609 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.82 | 52,243.18 Da | 60.85 | 78.70 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 289 | 334 | 2.6E-10 | IPR011598 |
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 24 | 196 | 3.0E-46 | IPR025610 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 283 | 349 | 1.18E-17 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 275 | 351 | 5.0E-17 | IPR036638 |
| SMART | SM00353 | finulus | 291 | 340 | 1.7E-15 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 285 | 334 | 17.027958 | IPR011598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 262 | 294 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 234 | 261 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 234 | 294 | - | - |
| Coils | Coil | Coil | 324 | 351 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00870.1 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein. | 0 |
| RefSeq | XP_011022409.1 | PREDICTED: transcription factor MYC2-like [Populus euphratica] | 0 |
| O23090 | Transcription factor bHLH14 OS=Arabidopsis thaliana OX=3702 GN=BHLH14 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T2Z817 | BHLH domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_006452 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology