Basic Information
Locus ID:
populus_peu34449
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 21725372 | 21726428 | + | populus_peu34449 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.05 | 24,423.40 Da | 52.63 | 77.95 | -0.87 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00183 | Hsp90 protein | 2 | 56 | 5.8E-26 | IPR001404 |
| Pfam | PF00183 | Hsp90 protein | 53 | 159 | 6.2E-28 | IPR001404 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 2 | 138 | 5.39E-45 | IPR020568 |
| Gene3D | G3DSA:3.40.50.11260 | - | 52 | 149 | 7.4E-26 | - |
| Gene3D | G3DSA:3.30.230.80 | - | 1 | 51 | 1.5E-23 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 143 | 210 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 194 | 210 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 143 | 169 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Pathway:
ko04141 (Protein processing in endoplasmic reticulum)
map04141 (Protein processing in endoplasmic reticulum)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
map04217 (Necroptosis)
ko04612 (Antigen processing and presentation)
map04612 (Antigen processing and presentation)
map04621 (NOD-like receptor signaling pathway)
ko04626 (Plant-pathogen interaction)
map04626 (Plant-pathogen interaction)
map04657 (IL-17 signaling pathway)
map04659 (Th17 cell differentiation)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G52640.1 | heat shock protein 90.1. Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance. | 0 |
| RefSeq | XP_030448958.1 | heat shock protein 83-like [Syzygium oleosum] | 0 |
| P51819 | Heat shock protein 83 OS=Ipomoea nil OX=35883 GN=HSP83A PE=2 SV=1 | 0 | |
| TrEMBL | A0A7J9ITB8 | HATPase_c domain-containing protein OS=Gossypium armourianum OX=34283 GN=Goarm_021976 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology