Basic Information
Locus ID:
populus_peu34448
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 21723527 | 21725349 | + | populus_peu34448 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.21 | 30,058.67 Da | 46.13 | 82.87 | -0.65 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00183 | Hsp90 protein | 147 | 253 | 5.9E-32 | IPR001404 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 14 | 171 | 1.29E-35 | IPR036890 |
| Gene3D | G3DSA:3.30.230.80 | - | 220 | 258 | 8.5E-7 | - |
| Gene3D | G3DSA:3.30.565.10 | - | 11 | 188 | 3.2E-47 | IPR036890 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 15 | 37 | 5.7E-33 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 82 | 99 | 5.7E-33 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 107 | 129 | 5.7E-33 | IPR020575 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 176 | 197 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 176 | 208 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Pathway:
ko04141 (Protein processing in endoplasmic reticulum)
map04141 (Protein processing in endoplasmic reticulum)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
map04217 (Necroptosis)
ko04612 (Antigen processing and presentation)
map04612 (Antigen processing and presentation)
map04621 (NOD-like receptor signaling pathway)
ko04626 (Plant-pathogen interaction)
map04626 (Plant-pathogen interaction)
map04657 (IL-17 signaling pathway)
map04659 (Th17 cell differentiation)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G52640.1 | heat shock protein 90.1. Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance. | 0 |
| RefSeq | XP_043717030.1 | heat shock protein 83-like [Telopea speciosissima] | 0 |
| P51819 | Heat shock protein 83 OS=Ipomoea nil OX=35883 GN=HSP83A PE=2 SV=1 | 0 | |
| TrEMBL | A0A1U8BJF5 | heat shock protein 83-like OS=Nelumbo nucifera OX=4432 GN=LOC104611516 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology