Basic Information
Locus ID:
populus_peu34349
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 21025339 | 21032438 | + | populus_peu34349 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.11 | 81,199.25 Da | 48.27 | 75.08 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 466 | 721 | 6.32984E-115 | - |
| CDD | cd00130 | PAS | 98 | 187 | 5.01994E-13 | IPR000014 |
| Pfam | PF00989 | PAS fold | 96 | 182 | 6.2E-12 | IPR013767 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 460 | 720 | 3.5E-60 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 448 | 720 | 1.89E-73 | IPR011009 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 79 | 187 | 2.79E-16 | IPR035965 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 453 | 537 | 1.5E-25 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 75 | 202 | 1.9E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 539 | 727 | 7.9E-55 | - |
| SMART | SM00220 | serkin_6 | 460 | 722 | 9.4E-50 | IPR000719 |
| SMART | SM00091 | pas_2 | 77 | 144 | 2.2E-7 | IPR000014 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 95 | 187 | 2.7E-14 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 460 | 725 | 40.96529 | IPR000719 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 97 | 147 | 12.807433 | IPR000014 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 466 | 487 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 579 | 591 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 573 | 591 | 5.1E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 692 | 714 | 5.1E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 648 | 670 | 5.1E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 534 | 547 | 5.1E-11 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 293 | 310 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 314 | 347 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 293 | 347 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 413 | 440 | - | - |
| Coils | Coil | Coil | 392 | 419 | - | - |
| Coils | Coil | Coil | 27 | 50 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23050.1 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_011033790.1 | PREDICTED: probable serine/threonine-protein kinase DDB_G0271682 isoform X1 [Populus euphratica] | 0 |
| Q9C9U5 | Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana OX=3702 GN=SIS8 PE=1 SV=1 | 0 | |
| TrEMBL | B9GW76 | Serine/threonine-protein kinase CTR1 OS=Populus trichocarpa OX=3694 GN=POPTR_003G122700 PE=4 SV=3 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology