Basic Information
Locus ID:
populus_peu34220
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 19869792 | 19877967 | - | populus_peu34220 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.41 | 144,657.25 Da | 46.07 | 70.67 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 1043 | 1300 | 1.66548E-113 | - |
| CDD | cd06410 | PB1_UP2 | 190 | 285 | 2.91352E-44 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1039 | 1300 | 1.0E-61 | IPR001245 |
| Pfam | PF00564 | PB1 domain | 203 | 285 | 9.8E-21 | IPR000270 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 202 | 291 | 1.23E-22 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1030 | 1300 | 1.18E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1030 | 1124 | 1.7E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1125 | 1312 | 7.9E-53 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 205 | 286 | 1.2E-12 | - |
| SMART | SM00220 | serkin_6 | 1037 | 1303 | 1.7E-59 | IPR000719 |
| SMART | SM00666 | PB1_new | 201 | 287 | 3.6E-30 | IPR000270 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1037 | 1302 | 41.050095 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1162 | 1174 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1043 | 1068 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1271 | 1293 | 4.6E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1227 | 1249 | 4.6E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1156 | 1174 | 4.6E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1119 | 1132 | 4.6E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 148 | 179 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 686 | 706 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 685 | 708 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 370 | 414 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 130 | 179 | - | - |
| Coils | Coil | Coil | 9 | 29 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35050.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_011033976.1 | PREDICTED: uncharacterized protein LOC105132286 [Populus euphratica] | 0 |
| O64768 | RAF-like serine/threonine-protein kinase 24 OS=Arabidopsis thaliana OX=3702 GN=RAF24 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T2Z8I1 | Protein kinase domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_006777 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology