Basic Information
Locus ID:
populus_peu34191
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 19610887 | 19616035 | + | populus_peu34191 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.03 | 112,994.59 Da | 32.98 | 101.31 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 537 | 558 | 0.31 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 250 | 272 | 0.44 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 717 | 986 | 3.7E-47 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 81 | 140 | 4.8E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 717 | 989 | 5.4E-72 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 313 | 622 | 2.3E-53 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 84 | 406 | 3.14E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 694 | 792 | 8.1E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 793 | 1001 | 1.4E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 341 | 635 | 4.4E-81 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 235 | 340 | 4.9E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 234 | 4.3E-45 | IPR032675 |
| SMART | SM00220 | serkin_6 | 714 | 993 | 2.1E-32 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 559 | 583 | 330.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 344 | 368 | 280.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 103 | 122 | 280.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 440 | 464 | 33.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 127 | 151 | 17.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 248 | 272 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 369 | 392 | 220.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 296 | 320 | 28.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 714 | 993 | 37.855812 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 840 | 852 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 720 | 743 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G61480.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_011027952.1 | PREDICTED: leucine-rich repeat receptor-like protein kinase TDR [Populus euphratica] | 0 |
| Q9FII5 | Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana OX=3702 GN=TDR PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X8A0V5 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_013777 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology