Basic Information
Locus ID:
populus_peu34033
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 18361873 | 18365383 | - | populus_peu34033 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.61 | 72,125.05 Da | 46.43 | 67.19 | -0.67 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd11449 | bHLH_AtAIB_like | 476 | 552 | 2.61858E-47 | - |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 483 | 528 | 1.4E-10 | IPR011598 |
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 69 | 250 | 1.5E-55 | IPR025610 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 482 | 554 | 7.85E-19 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 471 | 557 | 1.4E-17 | IPR036638 |
| SMART | SM00353 | finulus | 485 | 534 | 6.3E-17 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 479 | 528 | 17.389959 | IPR011598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 446 | 489 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 38 | 59 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 435 | 489 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 297 | 338 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 353 | 372 | - | - |
| Coils | Coil | Coil | 525 | 559 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G32640.1 | Basic helix-loop-helix (bHLH) DNA-binding family protein. Encodes a MYC-related transcriptional activator with a typical DNA binding domain of a basic helix-loop-helix leucine zipper motif. Binds to an extended G-Box promoter motif. Its transcription is induced by dehydration stress and ABA treatment. Negative regulator of blue lightmediated photomorphogenic growth and blue and far-red-lightregulated gene expression. Positive regulator of lateral root formation. Regulates diverse JA-dependent functions. Negatively regulates Trp metabolism and biosynthesis of Trp-derived secondary metabolites. Positively regulates flavonoid biosynthesis, resistance to insects, and response to oxidative stress. Regulates other transcription factors, and negatively regulates its own expression. | 0 |
| RefSeq | XP_011028179.1 | PREDICTED: transcription factor MYC2-like [Populus euphratica] | 0 |
| A0A3Q7HRZ6 | Transcription factor MYC2 OS=Solanum lycopersicum OX=4081 GN=MYC2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2K2B466 | BHLH family protein OS=Populus trichocarpa OX=3694 GN=POPTR_003G092200 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology