Basic Information
Locus ID:
populus_peu33994
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Belongs to the peptidase A1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 17945534 | 17947038 | + | populus_peu33994 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.48 | 44,162.46 Da | 39.34 | 77.24 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05476 | pepsin_A_like_plant | 91 | 406 | 2.40695E-55 | IPR034161 |
| Pfam | PF14541 | Xylanase inhibitor C-terminal | 258 | 402 | 9.3E-21 | IPR032799 |
| Pfam | PF14543 | Xylanase inhibitor N-terminal | 91 | 235 | 2.6E-34 | IPR032861 |
| SUPERFAMILY | SSF50630 | Acid proteases | 92 | 407 | 2.6E-66 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 234 | 409 | 6.8E-40 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 89 | 233 | 4.9E-29 | IPR021109 |
| ProSiteProfiles | PS51767 | Peptidase family A1 domain profile. | 71 | 402 | 24.831875 | IPR033121 |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 287 | 298 | - | IPR001969 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G33340.1 | Eukaryotic aspartyl protease family protein. Encodes a protein with aspartic protease activity (also known as aspartate-type endopeptidase activity). Overexpression of the gene was shown to lead to salicylic acid (SA)-mediated disease resistance upon exposure to the pathogen Pseudomonas syringae. Moreover, overexpression of this gene led to the upregulation of two pathogenesis-related genes PR1 and PR2. This upregulation was no longer observed in transgenic lines expressing the bacterial NahG gene encoding a hydroxylase suppressing SA accumulation. | 0 |
| RefSeq | XP_011028242.1 | PREDICTED: aspartic proteinase CDR1-like [Populus euphratica] | 0 |
| Q6XBF8 | Aspartic proteinase CDR1 OS=Arabidopsis thaliana OX=3702 GN=CDR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T2Z8N9 | Peptidase A1 domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_006989 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology