Basic Information
Locus ID:
populus_peu33851
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 16574226 | 16582572 | - | populus_peu33851 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.91 | 77,695.02 Da | 43.72 | 85.61 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 417 | 685 | 2.57245E-86 | - |
| Pfam | PF13855 | Leucine rich repeat | 98 | 153 | 1.6E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 159 | 201 | 1.5E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 69 | 8.2E-8 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 413 | 682 | 6.2E-44 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 27 | 232 | 1.87E-37 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 393 | 682 | 2.46E-72 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 489 | 707 | 2.8E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 390 | 487 | 3.4E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 250 | 4.4E-47 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 164 | 187 | 11.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 94 | 118 | 290.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 140 | 163 | 5.1 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 411 | 685 | 36.852299 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 417 | 439 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 247 | 282 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 693 | 716 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 262 | 278 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.1 | STRUBBELIG-receptor family 6. | 0 |
| RefSeq | XP_011031832.1 | PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 6-like [Populus euphratica] | 0 |
| Q9C8M9 | Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2K2B327 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_003G073700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology