Basic Information
Locus ID:
populus_peu33191
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
LysM domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 30715633 | 30717192 | - | populus_peu33191 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.09 | 27,569.27 Da | 28.41 | 100.68 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 50 | 222 | 3.6E-24 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 40 | 214 | 3.23E-33 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 34 | 235 | 1.0E-36 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 250 | 20.781939 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G33580.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_034931353.1 | LOW QUALITY PROTEIN: protein LYK5 [Populus alba] | 0 |
| O22808 | Protein LYK5 OS=Arabidopsis thaliana OX=3702 GN=LYK5 PE=2 SV=1 | 0 | |
| TrEMBL | B9GPL1 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_002G001600 PE=4 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology