Basic Information
Locus ID:
populus_peu33049
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
NEP1-interacting protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 29846366 | 29848118 | - | populus_peu33049 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.17 | 12,783.38 Da | 33.78 | 80.61 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 90 | 115 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_002307748.3 | NEP1-interacting protein-like 1 [Populus trichocarpa] | 0 |
| TrEMBL | A0A8X8ABT0 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_009310 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_8_RagTag.1302, evm.TU.Scaffold_8_RagTag.1307 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-5000 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-15343 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000018l.438 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00003086, Maker00003506 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-3312 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-11155 |
| Salicaceae | Populus euphratica | 2 | populus_peu15406, populus_peu33049 |