Basic Information
Locus ID:
populus_peu33021
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Receptor protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 29653871 | 29657837 | - | populus_peu33021 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.23 | 106,638.59 Da | 34.02 | 105.42 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 334 | 392 | 2.2E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 23 | 65 | 1.2E-4 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 263 | 322 | 1.4E-8 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 685 | 960 | 2.3E-43 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 302 | 633 | 2.55E-55 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 72 | 416 | 5.41E-63 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 676 | 960 | 1.21E-71 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 224 | 329 | 4.9E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 138 | 223 | 6.2E-21 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 762 | 969 | 1.0E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 649 | 761 | 5.8E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 330 | 622 | 1.9E-83 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 23 | 137 | 1.8E-22 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 333 | 357 | 90.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 572 | 597 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 285 | 309 | 58.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 237 | 261 | 57.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 548 | 571 | 130.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 684 | 960 | 9.5E-29 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 476 | 500 | 8.1 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 684 | 961 | 37.841679 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 806 | 818 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 360 | 373 | 4.2E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 548 | 561 | 4.2E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75820.1 | Leucine-rich receptor-like protein kinase family protein. Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain. | 0 |
| RefSeq | XP_011035001.1 | PREDICTED: receptor protein kinase CLAVATA1-like [Populus euphratica] | 0 |
| Q9SYQ8 | Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana OX=3702 GN=CLV1 PE=1 SV=3 | 0 | |
| TrEMBL | A0A2K2BC37 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_002G019900 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology