Basic Information
Locus ID:
populus_peu32170
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Short Name:
ATR1
Description:
belongs to the flavoprotein pyridine nucleotide cytochrome reductase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 23043261 | 23043990 | + | populus_peu32170 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.20 | 9,265.41 Da | 43.88 | 94.07 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52343 | Ferredoxin reductase-like, C-terminal NADP-linked domain | 3 | 66 | 2.06E-12 | IPR039261 |
| Gene3D | G3DSA:3.40.50.80 | - | 1 | 68 | 3.9E-15 | IPR039261 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G30210.2 | P450 reductase 2. Encodes NADPH-cytochrome P450 reductase that catalyzes the first oxidative step of the phenylpropanoid general pathway. | 0 |
| RefSeq | XP_034909322.1 | NADPH--cytochrome P450 reductase isoform X2 [Populus alba] | 0 |
| Q653S9 | NADPH--cytochrome P450 reductase 3 OS=Oryza sativa subsp. japonica OX=39947 GN=CPR3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X8DAF7 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_010046 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Schrenkiella parvula | 1 | SpUn0657_0010.v2.2 |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate02g14120, gene.Thate08g08970 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_032376 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0402840 |
| Poaceae | Zea mays | 5 | Zm00001eb010260_P001, Zm00001eb040630_P001 ... |
| Salicaceae | Populus euphratica | 1 | populus_peu32170 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132604019 |