Basic Information
Locus ID:
populus_peu32158
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 22878678 | 22883361 | + | populus_peu32158 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.48 | 39,836.64 Da | 51.12 | 71.72 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 71 | 357 | 8.5E-91 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 244 | 347 | 4.76E-21 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 241 | 359 | 6.8E-44 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 246 | 348 | 26.883707 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 180 | 216 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 194 | 210 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65670.2 | indole-3-acetic acid inducible 9. auxin (indole-3-acetic acid) induced gene | 0 |
| RefSeq | XP_011016963.1 | PREDICTED: auxin-responsive protein IAA9-like [Populus euphratica] | 0 |
| Q38827 | Auxin-responsive protein IAA9 OS=Arabidopsis thaliana OX=3702 GN=IAA9 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T2ZFU2 | Auxin-responsive protein OS=Populus deltoides OX=3696 GN=H0E87_004557 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology