Basic Information
Locus ID:
populus_peu31661
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 18667818 | 18674021 | - | populus_peu31661 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.43 | 97,544.47 Da | 54.03 | 77.98 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 832 | 872 | 3.22929E-23 | - |
| CDD | cd01989 | STK_N | 46 | 199 | 9.98049E-51 | - |
| Pfam | PF04564 | U-box domain | 829 | 872 | 7.1E-9 | IPR003613 |
| Pfam | PF00069 | Protein kinase domain | 544 | 796 | 1.2E-39 | IPR000719 |
| SUPERFAMILY | SSF57850 | RING/U-box | 822 | 872 | 6.18E-14 | - |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 46 | 167 | 6.17E-6 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 519 | 804 | 7.69E-66 | IPR011009 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 821 | 873 | 2.1E-19 | IPR013083 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 504 | 611 | 7.3E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 612 | 813 | 1.5E-47 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 39 | 170 | 4.7E-7 | IPR014729 |
| SMART | SM00220 | serkin_6 | 539 | 808 | 6.0E-32 | IPR000719 |
| SMART | SM00504 | Ubox_2 | 831 | 873 | 6.5E-4 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 539 | 818 | 33.67215 | IPR000719 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 827 | 873 | 24.725498 | IPR003613 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 658 | 670 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 545 | 566 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 268 | 292 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 213 | 235 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 268 | 306 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 212 | 235 | - | - |
| Coils | Coil | Coil | 369 | 397 | - | - |
| Coils | Coil | Coil | 407 | 511 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_011023325.1 | PREDICTED: U-box domain-containing protein 33-like [Populus euphratica] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2K2BJK6 | RING-type E3 ubiquitin transferase OS=Populus trichocarpa OX=3694 GN=POPTR_002G160200 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology