Basic Information
Locus ID:
populus_peu31660
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 18656392 | 18661730 | - | populus_peu31660 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.44 | 84,401.43 Da | 42.68 | 90.90 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 20 | 173 | 1.9101E-45 | - |
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 679 | 720 | 6.73103E-24 | - |
| Pfam | PF04564 | U-box domain | 676 | 745 | 1.2E-17 | IPR003613 |
| Pfam | PF00069 | Protein kinase domain | 394 | 643 | 5.3E-40 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 369 | 653 | 2.43E-67 | IPR011009 |
| SUPERFAMILY | SSF57850 | RING/U-box | 672 | 745 | 9.71E-24 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 376 | 463 | 2.2E-27 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 673 | 745 | 2.2E-27 | IPR013083 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 464 | 660 | 9.6E-46 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 9 | 138 | 1.3E-6 | IPR014729 |
| SMART | SM00220 | serkin_6 | 391 | 652 | 2.6E-29 | IPR000719 |
| SMART | SM00504 | Ubox_2 | 678 | 741 | 5.2E-28 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 391 | 656 | 34.378849 | IPR000719 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 674 | 745 | 38.179806 | IPR003613 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 397 | 418 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 509 | 521 | - | IPR008271 |
| Coils | Coil | Coil | 278 | 299 | - | - |
| Coils | Coil | Coil | 229 | 253 | - | - |
| Coils | Coil | Coil | 331 | 365 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_011023322.1 | PREDICTED: U-box domain-containing protein 37-like isoform X1 [Populus euphratica] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | B9GQA0 | RING-type E3 ubiquitin transferase OS=Populus trichocarpa OX=3694 GN=POPTR_002G160300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology