Basic Information
Locus ID:
populus_peu31340
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
PAPA-1-like conserved region
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 14976673 | 14980281 | - | populus_peu31340 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.57 | 61,693.32 Da | 68.35 | 60.45 | -1.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04795 | PAPA-1-like conserved region | 412 | 495 | 7.4E-21 | IPR006880 |
| SMART | SM01406 | PAPA_1_2 | 412 | 495 | 4.7E-31 | IPR006880 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 272 | 301 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 272 | 403 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 313 | 327 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 341 | 368 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 34 | 58 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 369 | 389 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 17 | 71 | - | - |
| Coils | Coil | Coil | 401 | 438 | - | - |
| Coils | Coil | Coil | 451 | 471 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G47350.1 | HIT zinc finger ;PAPA-1-like conserved region. | 0 |
| RefSeq | XP_011042266.1 | PREDICTED: uncharacterized protein LOC105137990 [Populus euphratica] | 0 |
| TrEMBL | A0A2K2BLF6 | PAPA-1 domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_002G195100 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology