Basic Information
Locus ID:
populus_peu31257
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Short Name:
RPL18
Description:
60S ribosomal protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 13469989 | 13472384 | - | populus_peu31257 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.40 | 15,863.36 Da | 30.93 | 83.33 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17135 | Ribosomal protein 60S L18 and 50S L18e | 32 | 144 | 5.3E-60 | IPR021131 |
| SUPERFAMILY | SSF52080 | Ribosomal proteins L15p and L18e | 27 | 96 | 2.88E-16 | IPR036227 |
| Gene3D | G3DSA:3.100.10.10 | - | 1 | 31 | 2.0E-7 | - |
| Gene3D | G3DSA:3.100.10.10 | - | 32 | 144 | 9.6E-62 | - |
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05590.1 | ribosomal protein L18. Encodes cytoplasmic ribosomal protein L18. | 0 |
| RefSeq | XP_034911746.1 | 60S ribosomal protein L18-2-like [Populus alba] | 0 |
| P42791 | Large ribosomal subunit protein eL18y OS=Arabidopsis thaliana OX=3702 GN=RPL18B PE=1 SV=2 | 0 | |
| TrEMBL | A0A059D2V5 | Ribosomal_L18e/L15P domain-containing protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_B01908 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology