Basic Information
Locus ID:
populus_peu31042
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Small ubiquitin-related modifier
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 3810400 | 3812482 | - | populus_peu31042 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.91 | 26,382.99 Da | 59.77 | 76.77 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16116 | Ubl_Smt3_like | 20 | 93 | 1.61179E-51 | - |
| Pfam | PF11976 | Ubiquitin-2 like Rad60 SUMO-like | 22 | 92 | 1.7E-24 | IPR022617 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 10 | 97 | 3.13E-27 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 97 | 4.5E-40 | - |
| SMART | SM00213 | ubq_7 | 22 | 93 | 8.9E-14 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 20 | 97 | 16.254545 | IPR000626 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G26840.1 | small ubiquitin-like modifier 1. Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets. | 0 |
| RefSeq | XP_011009683.1 | PREDICTED: small ubiquitin-related modifier 1-like [Populus euphratica] | 0 |
| P55852 | Small ubiquitin-related modifier 1 OS=Arabidopsis thaliana OX=3702 GN=SUMO1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8T2ZKQ0 | Ubiquitin-like domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_005708 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology