Basic Information
Locus ID:
populus_peu30558
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 19145565 | 19149182 | + | populus_peu30558 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.07 | 111,457.30 Da | 49.01 | 69.12 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00180 | PKc | 850 | 978 | 3.88682E-12 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 843 | 977 | 2.97E-15 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 839 | 986 | 2.4E-12 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 93 | 159 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 11 | 28 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 49 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 322 | 340 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 93 | 173 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 322 | 350 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G51800.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_011030014.1 | PREDICTED: uncharacterized protein LOC105129591 [Populus euphratica] | 0 |
| TrEMBL | A0A8T2XI79 | Protein kinase domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_021885 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_16080 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah019014 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_7g170120 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00006632 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl02092, Sgl07246 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000043240 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.3AG0001950, CQ.Regalona.r1.3BG0002040 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30181910 |
| Apiaceae | Apium graveolens | 1 | Ag2G01944 |
| Asteraceae | Flaveria trinervia | 1 | Ftri18G10036 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G51800.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10015853m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp6g14050.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB02g029180.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq02G2054 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl02G2122 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG01.2239 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb1G04370, Lb1G04382 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG01.1341, evm.TU.LG14.630 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_4_RagTag.184, evm.TU.Scaffold_4_RagTag.185 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-29165 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-6829 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-2108 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000008l.111 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00000204 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-17658 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-6224 |
| Salicaceae | Populus euphratica | 1 | populus_peu30558 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132631800 |
| Solanaceae | Solanum chilense | 1 | SOLCI005717800 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107013051 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_5187 |
| Tamaricaceae | Tamarix chinensis | 1 | TC06G1793 |