Basic Information
Locus ID:
populus_peu30350
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Lysosomal alpha-mannosidase-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 17541611 | 17554270 | - | populus_peu30350 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.24 | 119,348.83 Da | 38.45 | 88.60 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd10810 | GH38N_AMII_LAM_like | 36 | 290 | 7.68379E-157 | - |
| Pfam | PF17677 | Glycosyl hydrolases family 38 C-terminal beta sandwich domain | 875 | 935 | 3.2E-6 | IPR041147 |
| Pfam | PF07748 | Glycosyl hydrolases family 38 C-terminal domain | 581 | 793 | 2.6E-48 | IPR011682 |
| Pfam | PF09261 | Alpha mannosidase middle domain | 331 | 421 | 9.9E-23 | IPR015341 |
| Pfam | PF01074 | Glycosyl hydrolases family 38 N-terminal domain | 37 | 326 | 8.3E-79 | IPR000602 |
| SUPERFAMILY | SSF88713 | Glycoside hydrolase/deacetylase | 25 | 327 | 5.23E-97 | IPR011330 |
| SUPERFAMILY | SSF74650 | Galactose mutarotase-like | 435 | 946 | 7.22E-136 | IPR011013 |
| SUPERFAMILY | SSF88688 | Families 57/38 glycoside transferase middle domain | 331 | 428 | 5.89E-28 | IPR028995 |
| Gene3D | G3DSA:2.70.98.30 | - | 578 | 841 | 9.6E-93 | - |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 294 | 373 | 1.8E-30 | IPR037094 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 374 | 429 | 2.2E-22 | IPR037094 |
| Gene3D | G3DSA:2.60.40.1180 | - | 451 | 577 | 1.1E-28 | IPR013780 |
| Gene3D | G3DSA:2.60.40.1360 | - | 861 | 975 | 1.0E-26 | - |
| Gene3D | G3DSA:3.20.110.10 | Glycoside hydrolase 38, N terminal domain | 36 | 293 | 5.5E-103 | IPR027291 |
| SMART | SM00872 | Alpha_mann_mid_2 | 331 | 405 | 1.8E-23 | IPR015341 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G13980.1 | Glycosyl hydrolase family 38 protein. | 0 |
| RefSeq | XP_011042968.1 | PREDICTED: alpha-mannosidase-like [Populus euphratica] | 0 |
| Q8LPJ3 | Probable alpha-mannosidase At5g13980 OS=Arabidopsis thaliana OX=3702 GN=At5g13980 PE=2 SV=1 | 0 | |
| TrEMBL | A0A4U5MHN0 | Alpha-mannosidase OS=Populus alba OX=43335 GN=D5086_0000307110 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology