Basic Information
Locus ID:
populus_peu30268
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Domain of unknown function (DUF3444)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 16803726 | 16807824 | - | populus_peu30268 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.52 | 67,007.64 Da | 35.51 | 59.88 | -0.83 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 66 | 119 | 2.97234E-18 | IPR001623 |
| Pfam | PF11926 | Domain of unknown function (DUF3444) | 474 | 591 | 4.0E-36 | IPR024593 |
| Pfam | PF00226 | DnaJ domain | 66 | 127 | 9.1E-20 | IPR001623 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 59 | 123 | 7.85E-21 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 64 | 173 | 1.3E-21 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 65 | 122 | 1.8E-21 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 66 | 130 | 16.629852 | IPR001623 |
| ProSitePatterns | PS00636 | Nt-dnaJ domain signature. | 107 | 126 | - | IPR018253 |
| PRINTS | PR00625 | DnaJ domain signature | 68 | 86 | 2.2E-11 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 102 | 122 | 2.2E-11 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 86 | 101 | 2.2E-11 | IPR001623 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 128 | 178 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 301 | 318 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 144 | 169 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 300 | 381 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 319 | 339 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 351 | 381 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G53150.2 | - | 0 |
| RefSeq | XP_011044129.1 | PREDICTED: uncharacterized protein LOC105139412 [Populus euphratica] | 0 |
| Q87VN8 | Curved DNA-binding protein OS=Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000) OX=223283 GN=cbpA PE=3 SV=1 | 0 | |
| TrEMBL | A0A2K1YBK0 | J domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_012G098800 PE=4 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology