Basic Information
Locus ID:
populus_peu30148
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 15693876 | 15695254 | - | populus_peu30148 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.51 | 45,753.13 Da | 28.53 | 88.95 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 4 | 86 | 4.4E-10 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 308 | 398 | 6.0E-12 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 116 | 199 | 5.7E-11 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 284 | 398 | 5.74E-25 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 273 | 382 | 9.7E-31 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 2 | 88 | 3.1E-12 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 103 | 202 | 8.4E-14 | IPR038408 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 1 | 88 | 14.207721 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 96 | 202 | 13.55597 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 307 | 411 | 13.446394 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40380.3 | - | 0 |
| RefSeq | XP_024438039.2 | cysteine-rich receptor-like protein kinase 1 isoform X1 [Populus trichocarpa] | 0 |
| Q9FNE1 | Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana OX=3702 GN=CRK42 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X7YRV7 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_042120 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_11_RagTag.1037 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-14716, nbisL1-mrna-14717 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-5018 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-12600 |
| Salicaceae | Populus euphratica | 2 | populus_peu30147, populus_peu30148 |
| Solanaceae | Solanum chilense | 1 | SOLCI004021600 |