Basic Information
Locus ID:
populus_peu29969
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Short Name:
CPK13
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 13000542 | 13004899 | - | populus_peu29969 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.95 | 56,781.16 Da | 38.97 | 82.61 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 379 | 437 | 1.65971E-16 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 72 | 330 | 1.77526E-138 | - |
| Pfam | PF00036 | EF hand | 451 | 476 | 2.2E-6 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 75 | 331 | 1.0E-74 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 377 | 438 | 3.2E-11 | IPR002048 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 52 | 356 | 1.75E-86 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 355 | 498 | 3.15E-35 | IPR011992 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 74 | 158 | 2.2E-27 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 340 | 499 | 1.3E-44 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 159 | 339 | 1.5E-60 | - |
| SMART | SM00054 | efh_1 | 378 | 406 | 9.8E-7 | IPR002048 |
| SMART | SM00054 | efh_1 | 450 | 478 | 3.4E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 414 | 442 | 0.0032 | IPR002048 |
| SMART | SM00220 | serkin_6 | 73 | 331 | 1.2E-96 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 446 | 481 | 14.373928 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 410 | 445 | 10.050141 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 374 | 409 | 15.82449 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 73 | 331 | 48.993404 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 79 | 102 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 459 | 471 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 193 | 205 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 387 | 399 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 423 | 435 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 53 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 36 | 53 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 13 | 35 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G18890.1 | calcium-dependent protein kinase 1. encodes a calcium-dependent protein kinase whose gene expression is induced by dehydration and high salt. Kinase activity could not be detected in vitro. | 0 |
| RefSeq | XP_002318616.1 | calcium-dependent protein kinase 10 [Populus trichocarpa] | 0 |
| Q9M9V8 | Calcium-dependent protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CPK10 PE=1 SV=1 | 0 | |
| TrEMBL | B9I317 | Calcium-dependent protein kinase 30 OS=Populus trichocarpa OX=3694 GN=POPTR_012G071700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology