Basic Information
Locus ID:
populus_peu29961
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Short Name:
CPK13
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 12656030 | 12660228 | - | populus_peu29961 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.80 | 60,195.82 Da | 37.42 | 81.28 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 72 | 305 | 4.33754E-114 | - |
| CDD | cd00051 | EFh | 425 | 487 | 1.03168E-19 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 352 | 413 | 3.5E-11 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 185 | 306 | 3.6E-32 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 75 | 183 | 2.9E-22 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 424 | 487 | 4.0E-14 | IPR002048 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 52 | 331 | 4.57E-71 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 334 | 513 | 1.83E-45 | IPR011992 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 184 | 311 | 9.7E-39 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 65 | 183 | 2.2E-29 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 314 | 490 | 6.1E-54 | - |
| SMART | SM00054 | efh_1 | 425 | 453 | 3.4E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 461 | 489 | 7.7E-7 | IPR002048 |
| SMART | SM00054 | efh_1 | 389 | 417 | 0.0032 | IPR002048 |
| SMART | SM00054 | efh_1 | 353 | 381 | 9.8E-7 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 457 | 492 | 14.318138 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 421 | 456 | 14.373928 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 349 | 384 | 15.82449 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 385 | 420 | 10.050141 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 73 | 306 | 32.216347 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 79 | 102 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 398 | 410 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 362 | 374 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 470 | 482 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 434 | 446 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 53 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 13 | 35 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 36 | 53 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G18890.1 | calcium-dependent protein kinase 1. encodes a calcium-dependent protein kinase whose gene expression is induced by dehydration and high salt. Kinase activity could not be detected in vitro. | 0 |
| RefSeq | XP_002318616.1 | calcium-dependent protein kinase 10 [Populus trichocarpa] | 0 |
| Q9M9V8 | Calcium-dependent protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CPK10 PE=1 SV=1 | 0 | |
| TrEMBL | B9I317 | Calcium-dependent protein kinase 30 OS=Populus trichocarpa OX=3694 GN=POPTR_012G071700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology