Basic Information
Locus ID:
populus_peu29917
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
RING finger and CHY zinc finger domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 10754063 | 10758167 | - | populus_peu29917 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.55 | 32,808.21 Da | 43.82 | 53.10 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF05495 | CHY zinc finger | 31 | 112 | 2.1E-19 | IPR008913 |
| Pfam | PF14599 | Zinc-ribbon | 213 | 271 | 2.3E-27 | IPR039512 |
| SUPERFAMILY | SSF161245 | Zinc hairpin stack | 103 | 160 | 1.7E-19 | IPR037275 |
| SUPERFAMILY | SSF161219 | CHY zinc finger-like | 27 | 102 | 1.02E-16 | IPR037274 |
| Gene3D | G3DSA:2.20.28.10 | - | 237 | 277 | 9.7E-20 | - |
| ProSiteProfiles | PS51270 | Zinc finger CTCHY-type profile. | 102 | 166 | 35.615501 | IPR017921 |
| ProSiteProfiles | PS51266 | Zinc finger CHY-type profile. | 24 | 100 | 25.895082 | IPR008913 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22920.1 | CHY-type/CTCHY-type/RING-type Zinc finger protein. | 0 |
| RefSeq | XP_011032318.1 | PREDICTED: RING finger and CHY zinc finger domain-containing protein 1 isoform X1 [Populus euphratica] | 0 |
| Q9FFB6 | E3 ubiquitin-protein ligase RZFP34 OS=Arabidopsis thaliana OX=3702 GN=RZPF34 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6M2F1H0 | RING-type domain-containing protein OS=Populus davidiana OX=266767 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology