Basic Information
Locus ID:
populus_peu29817
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
ubiquitin protein ligase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 6623644 | 6633293 | - | populus_peu29817 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.50 | 128,378.51 Da | 49.60 | 79.89 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12108 | Hr-like | 648 | 808 | 2.33294E-27 | - |
| CDD | cd12108 | Hr-like | 305 | 434 | 1.53429E-20 | - |
| CDD | cd12108 | Hr-like | 43 | 170 | 7.17208E-31 | - |
| Pfam | PF05495 | CHY zinc finger | 993 | 1068 | 1.0E-18 | IPR008913 |
| Pfam | PF01814 | Hemerythrin HHE cation binding domain | 646 | 809 | 3.5E-7 | IPR012312 |
| Pfam | PF01814 | Hemerythrin HHE cation binding domain | 303 | 436 | 9.9E-9 | IPR012312 |
| Pfam | PF01814 | Hemerythrin HHE cation binding domain | 45 | 172 | 1.1E-12 | IPR012312 |
| SUPERFAMILY | SSF161219 | CHY zinc finger-like | 985 | 1049 | 7.72E-17 | IPR037274 |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 304 | 452 | 1.8E-17 | - |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 38 | 190 | 6.1E-31 | - |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 642 | 874 | 1.7E-23 | - |
| ProSiteProfiles | PS51266 | Zinc finger CHY-type profile. | 986 | 1055 | 25.556404 | IPR008913 |
| Coils | Coil | Coil | 311 | 331 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G18290.1 | zinc finger protein-related. Encodes BRUTUS (BTS), a putative E3 ligase protein with metal ion binding and DNA binding domains, which negatively regulates the response to iron deficiency. | 0 |
| RefSeq | XP_011045838.1 | PREDICTED: uncharacterized protein LOC105140635 isoform X4 [Populus euphratica] | 0 |
| Q8LPQ5 | Zinc finger protein BRUTUS OS=Arabidopsis thaliana OX=3702 GN=BTS PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T2XG93 | CHY-type domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_021430 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology