Basic Information
Locus ID:
populus_peu28753
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Short Name:
AFC2
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 17590494 | 17594333 | - | populus_peu28753 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.16 | 40,430.29 Da | 47.43 | 88.15 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14134 | PKc_CLK | 1 | 339 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 12 | 339 | 5.8E-52 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 5 | 342 | 5.13E-79 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 66 | 339 | 3.1E-113 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 3 | 92 | 3.1E-113 | - |
| SMART | SM00220 | serkin_6 | 12 | 339 | 3.8E-77 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 12 | 339 | 37.968884 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 133 | 145 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24740.7 | - | 0 |
| RefSeq | XP_002322208.1 | serine/threonine-protein kinase AFC2 isoform X1 [Populus trichocarpa] | 0 |
| P51567 | Serine/threonine-protein kinase AFC2 OS=Arabidopsis thaliana OX=3702 GN=AFC2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T2X379 | Protein kinase domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_025732 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology