Basic Information
Locus ID:
populus_peu28542
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Short Name:
CPK13
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 14999849 | 15003886 | - | populus_peu28542 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.07 | 63,657.80 Da | 38.20 | 81.40 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 75 | 333 | 3.10075E-138 | - |
| CDD | cd00051 | EFh | 453 | 515 | 6.52819E-21 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 452 | 515 | 8.0E-15 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 380 | 441 | 3.8E-11 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 78 | 334 | 1.3E-74 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 358 | 527 | 2.23E-46 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 55 | 363 | 6.07E-87 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 162 | 342 | 7.1E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 77 | 161 | 1.7E-27 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 343 | 518 | 5.8E-55 | - |
| SMART | SM00054 | efh_1 | 417 | 445 | 0.0032 | IPR002048 |
| SMART | SM00220 | serkin_6 | 76 | 334 | 6.3E-98 | IPR000719 |
| SMART | SM00054 | efh_1 | 453 | 481 | 3.9E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 489 | 517 | 7.7E-7 | IPR002048 |
| SMART | SM00054 | efh_1 | 381 | 409 | 9.8E-7 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 76 | 334 | 49.177147 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 449 | 484 | 15.294476 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 485 | 520 | 14.680779 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 413 | 448 | 10.050141 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 377 | 412 | 15.82449 | IPR002048 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 196 | 208 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 82 | 105 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 390 | 402 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 498 | 510 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 426 | 438 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 462 | 474 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 64 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 39 | 53 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G18890.1 | calcium-dependent protein kinase 1. encodes a calcium-dependent protein kinase whose gene expression is induced by dehydration and high salt. Kinase activity could not be detected in vitro. | 0 |
| RefSeq | XP_024442700.1 | calcium-dependent protein kinase 30 [Populus trichocarpa] | 0 |
| Q9M9V8 | Calcium-dependent protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CPK10 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2K1XJ35 | Calcium-dependent protein kinase 30 OS=Populus trichocarpa OX=3694 GN=POPTR_015G066200 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology