Basic Information
Locus ID:
populus_peu28322
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 5887057 | 5887931 | + | populus_peu28322 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.38 | 13,965.91 Da | 54.21 | 79.60 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1 | 88 | 2.1E-21 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 99 | 3.56E-26 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 124 | 2.7E-30 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 92 | 13.898683 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 92 | 125 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G73660.1 | protein tyrosine kinase family protein. Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance. | 0 |
| RefSeq | XP_011008344.1 | PREDICTED: serine/threonine-protein kinase EDR1 isoform X2 [Populus euphratica] | 0 |
| Q9C9U5 | Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana OX=3702 GN=SIS8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6M2EN21 | Protein kinase domain-containing protein OS=Populus davidiana OX=266767 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000023760 |
| Arecaceae | Cocos nucifera | 2 | COCNU_07G007120, scaffold038440G000020 |
| Brassicaceae | Brassica nigra | 3 | BniB02g080230.2N, BniB04g023250.2N, BniB07g059490.2N |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.3018s00001.v1.0 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-5472 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr13G015500 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-34314 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_11_RagTag.721 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-3393 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-5270 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-1046 |
| Salicaceae | Populus euphratica | 1 | populus_peu28322 |