Basic Information
Locus ID:
populus_peu28315
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
AMSH-like ubiquitin thioesterase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 5405483 | 5409205 | - | populus_peu28315 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.11 | 21,610.50 Da | 58.23 | 74.64 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08066 | MPN_AMSH_like | 17 | 192 | 6.73526E-102 | IPR044098 |
| Pfam | PF01398 | JAB1/Mov34/MPN/PAD-1 ubiquitin protease | 15 | 121 | 2.0E-19 | IPR000555 |
| SUPERFAMILY | SSF102712 | JAB1/MPN domain | 17 | 148 | 1.2E-21 | - |
| Gene3D | G3DSA:3.40.140.10 | Cytidine Deaminase, domain 2 | 11 | 192 | 2.2E-72 | - |
| SMART | SM00232 | pad1_6 | 17 | 145 | 5.5E-21 | IPR000555 |
| ProSiteProfiles | PS50249 | MPN domain profile. | 18 | 148 | 31.737915 | IPR037518 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48790.1 | associated molecule with the SH3 domain of STAM 1. | 0 |
| RefSeq | XP_011008312.1 | PREDICTED: AMSH-like ubiquitin thioesterase 1 [Populus euphratica] | 0 |
| Q8VYB5 | AMSH-like ubiquitin thioesterase 1 OS=Arabidopsis thaliana OX=3702 GN=AMSH1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8T2X1B9 | MPN domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_026039 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology