Basic Information
Locus ID:
populus_peu28146
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
ATPase family associated with various cellular activities (AAA)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 2472837 | 2475777 | + | populus_peu28146 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.03 | 62,575.44 Da | 43.59 | 79.21 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 243 | 376 | 1.81978E-24 | - |
| Pfam | PF17862 | AAA+ lid domain | 397 | 440 | 3.9E-12 | IPR041569 |
| Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) | 245 | 375 | 4.9E-38 | IPR003959 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 204 | 432 | 1.25E-57 | IPR027417 |
| Gene3D | G3DSA:1.10.8.60 | - | 377 | 452 | 2.0E-94 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 204 | 376 | 2.0E-94 | IPR027417 |
| SMART | SM00382 | AAA_5 | 241 | 378 | 1.8E-20 | IPR003593 |
| ProSitePatterns | PS00674 | AAA-protein family signature. | 348 | 367 | - | IPR003960 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 434 | 464 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 143 | 193 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 143 | 172 | - | - |
| Coils | Coil | Coil | 428 | 448 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G52882.1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_011047745.1 | PREDICTED: nuclear valosin-containing protein-like isoform X1 [Populus euphratica] | 0 |
| Q6NW58 | Spastin OS=Danio rerio OX=7955 GN=spast PE=2 SV=2 | 0 | |
| TrEMBL | A0A8T2X323 | AAA domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_026186 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology