Basic Information
Locus ID:
populus_peu27693
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 20932223 | 20939583 | - | populus_peu27693 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.97 | 99,024.83 Da | 54.09 | 80.18 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 47 | 200 | 1.27425E-44 | - |
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 817 | 858 | 8.94971E-24 | - |
| Pfam | PF04564 | U-box domain | 814 | 882 | 2.5E-15 | IPR003613 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 529 | 783 | 1.8E-36 | IPR001245 |
| SUPERFAMILY | SSF57850 | RING/U-box | 807 | 878 | 3.53E-22 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 518 | 791 | 9.05E-58 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 600 | 802 | 6.3E-48 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 37 | 184 | 1.1E-5 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 541 | 599 | 6.3E-15 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 811 | 883 | 3.0E-25 | IPR013083 |
| SMART | SM00220 | serkin_6 | 518 | 793 | 7.5E-19 | IPR000719 |
| SMART | SM00504 | Ubox_2 | 816 | 879 | 2.3E-24 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 518 | 794 | 30.082111 | IPR000719 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 812 | 883 | 34.296543 | IPR003613 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 644 | 656 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 271 | 320 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 270 | 320 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 213 | 233 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 494 | 517 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 494 | 513 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 214 | 233 | - | - |
| Coils | Coil | Coil | 362 | 390 | - | - |
| Coils | Coil | Coil | 456 | 490 | - | - |
| Coils | Coil | Coil | 407 | 448 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_011036393.1 | PREDICTED: U-box domain-containing protein 33-like isoform X1 [Populus euphratica] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3N7HIM1 | RING-type E3 ubiquitin transferase OS=Populus trichocarpa OX=3694 GN=POPTR_014G084900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology