Basic Information
Locus ID:
populus_peu27654
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Protein BPS1, chloroplastic-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 20639989 | 20643579 | + | populus_peu27654 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.57 | 39,408.14 Da | 37.46 | 97.72 | -0.09 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46080.1 | 0 | |
| RefSeq | XP_011036941.1 | PREDICTED: protein BPS1, chloroplastic [Populus euphratica] | 0 |
| Q9LMM6 | Protein BPS1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BPS1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6M2F9E1 | Protein BPS1, chloroplastic-like OS=Populus davidiana OX=266767 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 4 | jg1944, jg26883, jg29383, jg29622 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah022957 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_1g004160 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg4558, Sbi_jg49277 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg5965 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00000487 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl11033, Sgl16440 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000013774, gene:ENSEOMG00000035568 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.1AG0003280, CQ.Regalona.r1.2BG0025270 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30004870 |
| Apiaceae | Apium graveolens | 2 | Ag6G00196, Ag6G01574 |
| Arecaceae | Cocos nucifera | 3 | COCNU_08G007260, COCNU_10G004630, scaffold069565G000010 |
| Arecaceae | Phoenix dactylifera | 3 | gene-LOC103712204, gene-LOC103715797, gene-LOC103717129 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_04.2236.V1.1, AsparagusV1_08.273.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | FtriNA24515 |
| Brassicaceae | Arabidopsis thaliana | 3 | AT1G01550.1, AT2G46080.1, AT4G01360.1 |
| Brassicaceae | Eutrema salsugineum | 3 | Thhalv10001526m.g.v1.0, Thhalv10008079m.g.v1.0 ... |
| Brassicaceae | Schrenkiella parvula | 4 | Sp1g00770.v2.2, Sp4g28140.v2.2, Sp5g01900.v2.2 ... |
| Brassicaceae | Brassica nigra | 5 | BniB01g001070.2N, BniB03g037000.2N, BniB04g043680.2N ... |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq02G0977 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl02G1027 |
| Cymodoceaceae | Cymodocea nodosa | 2 | gene.Cymno12g04760, gene.Cymno15g03870 |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate02g04560, gene.Thate07g02910 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-9512 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG04.821 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00001448 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb1G03564, Lb2G11148 |
| Poaceae | Echinochloa crus-galli | 3 | AH01.1597, BH01.1793, CH01.1885 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_2AG0113690, gene-QOZ80_2BG0166860 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_011929, gene-QYE76_012050 |
| Poaceae | Oryza coarctata | 1 | Oco20G007800 |
| Poaceae | Oryza sativa | 1 | LOC_Os10g36950.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G177600 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0502872 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr06G029480, Chr06G029490, Chr09G002680, Chr15G020730 |
| Poaceae | Thinopyrum elongatum | 1 | Tel1E01G317600 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC1AG027080, gene_TRIDC1BG033860 |
| Poaceae | Triticum aestivum | 3 | TraesCS1A02G177400.1.cds1, TraesCS1B02G202800.1.cds1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb043640_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-34386 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g15514 |
| Portulacaceae | Portulaca oleracea | 4 | evm.TU.LG04.2242, evm.TU.LG06.63, evm.TU.LG19.949 ... |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc07g05090, gene.Posoc09g02260 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_5_RagTag.458, evm.TU.Scaffold_9_RagTag.533 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-10817, nbisL1-mrna-21654 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-16294, nbisL1-mrna-6815 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-10378, nbisL1-mrna-7345 |
| Rhizophoraceae | Kandelia candel | 2 | add.evm.TU.utg000003l.85, add.evm.TU.utg000006l.170 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00013553, Maker00017673 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-17417, nbisL1-mrna-20794 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-19616, nbisL1-mrna-7213 |
| Salicaceae | Populus euphratica | 2 | populus_peu27654, populus_peu31635 |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132632686, gene-LOC132645547 |
| Solanaceae | Solanum chilense | 1 | SOLCI001073400 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107002449, gene-LOC107005440 |
| Tamaricaceae | Reaumuria soongarica | 2 | STRG.15107_chr06_+, STRG.29010_chr11_+ |
| Tamaricaceae | Tamarix chinensis | 2 | TC03G2209, TC09G2248 |
| Zosteraceae | Zostera marina | 3 | Zosma05g00560.v3.1, Zosma06g11140.v3.1, Zosma481g00040.v3.1 |