Basic Information
Locus ID:
populus_peu27509
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 19399699 | 19402040 | - | populus_peu27509 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.67 | 58,716.55 Da | 53.01 | 80.36 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd11449 | bHLH_AtAIB_like | 311 | 375 | 1.69067E-40 | - |
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 25 | 208 | 1.4E-56 | IPR025610 |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 317 | 362 | 5.6E-10 | IPR011598 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 314 | 377 | 5.23E-17 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 313 | 379 | 5.1E-16 | IPR036638 |
| SMART | SM00353 | finulus | 319 | 368 | 1.6E-15 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 313 | 362 | 16.577044 | IPR011598 |
| Coils | Coil | Coil | 352 | 386 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G46760.1 | Basic helix-loop-helix (bHLH) DNA-binding family protein. | 0 |
| RefSeq | XP_011039024.1 | PREDICTED: transcription factor MYC2 isoform X1 [Populus euphratica] | 0 |
| Q9FIP9 | Transcription factor MYC3 OS=Arabidopsis thaliana OX=3702 GN=MYC3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3N7G127 | BHLH domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G103700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology