Basic Information
Locus ID:
populus_peu27209
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
RING finger and CHY zinc finger domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 17167059 | 17169354 | - | populus_peu27209 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.43 | 16,816.77 Da | 61.51 | 52.41 | -0.78 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF05495 | CHY zinc finger | 29 | 109 | 4.3E-21 | IPR008913 |
| SUPERFAMILY | SSF161219 | CHY zinc finger-like | 22 | 98 | 1.96E-19 | IPR037274 |
| SUPERFAMILY | SSF161245 | Zinc hairpin stack | 100 | 137 | 2.35E-13 | IPR037275 |
| ProSiteProfiles | PS51266 | Zinc finger CHY-type profile. | 22 | 97 | 25.544924 | IPR008913 |
| ProSiteProfiles | PS51270 | Zinc finger CTCHY-type profile. | 99 | 145 | 22.199226 | IPR017921 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G18650.1 | CHY-type/CTCHY-type/RING-type Zinc finger protein. | 0 |
| RefSeq | XP_011033604.1 | PREDICTED: RING finger and CHY zinc finger domain-containing protein 1 isoform X2 [Populus euphratica] | 0 |
| Q8VZK0 | E3 ubiquitin-protein ligase MIEL1 OS=Arabidopsis thaliana OX=3702 GN=MIEL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7YH22 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_046985 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology