Basic Information
Locus ID:
populus_peu27104
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 16298424 | 16303371 | + | populus_peu27104 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.10 | 107,179.71 Da | 30.89 | 102.53 | 0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 792 | 943 | 8.6E-29 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 68 | 3.0E-10 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 132 | 191 | 1.3E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 769 | 946 | 1.75E-51 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 91 | 407 | 1.57E-53 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 494 | 684 | 6.8E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 865 | 967 | 1.6E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 200 | 289 | 2.5E-21 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 750 | 864 | 1.2E-27 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 199 | 1.8E-42 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 290 | 421 | 5.1E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 449 | 706 | 2.1E-51 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 251 | 275 | 28.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 206 | 227 | 330.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 612 | 636 | 25.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 154 | 178 | 87.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 104 | 128 | 340.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 129 | 153 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 564 | 588 | 26.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 789 | 973 | 5.4E-11 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 789 | 981 | 30.421328 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 909 | 921 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 795 | 817 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 181 | 194 | 8.1E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 612 | 625 | 8.1E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_011006137.1 | PREDICTED: LRR receptor-like serine/threonine-protein kinase RPK2 [Populus euphratica] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T2X846 | Protein kinase domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_024849 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology