Basic Information
Locus ID:
populus_peu26996
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Chitin elicitor receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 14974676 | 14982198 | + | populus_peu26996 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.51 | 55,827.06 Da | 34.34 | 93.19 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00118 | LysM | 165 | 192 | 0.00159686 | IPR018392 |
| Pfam | PF01476 | LysM domain | 169 | 196 | 0.0021 | IPR018392 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 318 | 488 | 1.3E-34 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 297 | 491 | 4.05E-61 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 286 | 386 | 2.4E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 387 | 498 | 1.8E-31 | - |
| SMART | SM00220 | serkin_6 | 316 | 495 | 6.9E-12 | IPR000719 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 164 | 212 | 8.830801 | IPR018392 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 316 | 502 | 33.67215 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 322 | 344 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 431 | 443 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21630.1 | chitin elicitor receptor kinase 1. LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane. | 0 |
| RefSeq | XP_011047220.1 | PREDICTED: chitin elicitor receptor kinase 1-like [Populus euphratica] | 0 |
| Q6UD73 | LysM domain receptor-like kinase 3 OS=Medicago truncatula OX=3880 GN=LYK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2K1XWC8 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G156400 PE=4 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology