Basic Information
Locus ID:
populus_peu26883
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Fasciclin-like arabinogalactan protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 12925156 | 12926792 | - | populus_peu26883 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.65 | 42,663.25 Da | 33.82 | 94.38 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02469 | Fasciclin domain | 198 | 326 | 6.1E-13 | IPR000782 |
| Pfam | PF02469 | Fasciclin domain | 36 | 113 | 3.9E-6 | IPR000782 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 31 | 173 | 1.57E-17 | IPR036378 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 182 | 327 | 6.41E-18 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 188 | 327 | 4.4E-10 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 24 | 173 | 3.3E-10 | IPR036378 |
| SMART | SM00554 | fasc_3 | 223 | 327 | 2.5E-11 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 25 | 173 | 12.585814 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 185 | 324 | 11.64472 | IPR000782 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 334 | 352 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 334 | 366 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G12730.1 | FASCICLIN-like arabinogalactan 2. AF333971 Arabidopsis thaliana fasciclin-like arabinogalactan-protein 2 (Fla2) mRNA, complete cds | 0 |
| RefSeq | XP_011011127.1 | PREDICTED: fasciclin-like arabinogalactan protein 2 [Populus euphratica] | 0 |
| Q9SU13 | Fasciclin-like arabinogalactan protein 2 OS=Arabidopsis thaliana OX=3702 GN=FLA2 PE=2 SV=1 | 0 | |
| TrEMBL | B9IAU1 | Fasciclin-like arabinogalactan protein 2 OS=Populus trichocarpa OX=3694 GN=POPTR_014G168100 PE=3 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology