Basic Information
Locus ID:
populus_peu26629
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
glycerophosphoryl diester phosphodiesterase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 3332137 | 3338294 | + | populus_peu26629 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.53 | 79,237.71 Da | 43.73 | 98.67 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08603 | GDPD_SHV3_repeat_1 | 41 | 314 | 2.20554E-152 | - |
| CDD | cd08604 | GDPD_SHV3_repeat_2 | 332 | 632 | 6.2757E-160 | - |
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | 338 | 627 | 3.8E-28 | IPR030395 |
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | 76 | 172 | 3.7E-6 | IPR030395 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 332 | 632 | 1.49E-41 | IPR017946 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 39 | 311 | 2.2E-40 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 331 | 632 | 1.6E-44 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 40 | 314 | 8.8E-32 | IPR017946 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 41 | 327 | 34.776016 | IPR030395 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 332 | 633 | 37.504372 | IPR030395 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G26690.1 | PLC-like phosphodiesterase family protein. Glycerophosphoryl diester phosphodiesterase-like protein involved in cell wall cellulose accumulation and pectin linking. Impacts root hair, trichome and epidermal cell development. | 0 |
| RefSeq | XP_011013351.1 | PREDICTED: glycerophosphodiester phosphodiesterase GDPDL3-like [Populus euphratica] | 0 |
| Q9SZ11 | Glycerophosphodiester phosphodiesterase GDPDL3 OS=Arabidopsis thaliana OX=3702 GN=GDPDL3 PE=2 SV=3 | 0 | |
| TrEMBL | A0A4U5QA56 | glycerophosphodiester phosphodiesterase OS=Populus alba OX=43335 GN=D5086_0000119980 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology