Basic Information
Locus ID:
populus_peu26589
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 311219 | 318532 | + | populus_peu26589 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.28 | 83,632.62 Da | 40.63 | 75.62 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 460 | 717 | 8.3894E-115 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 455 | 717 | 5.2E-63 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 446 | 716 | 1.78E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 447 | 541 | 4.5E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 542 | 741 | 2.5E-53 | - |
| SMART | SM00220 | serkin_6 | 454 | 720 | 2.9E-56 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 454 | 720 | 41.106632 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 460 | 481 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 579 | 591 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 573 | 591 | 2.2E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 644 | 666 | 2.2E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 536 | 549 | 2.2E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 688 | 710 | 2.2E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 26 | 75 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 42 | 75 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 26 | 41 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16270.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_011007211.1 | PREDICTED: uncharacterized protein LOC105112965 [Populus euphratica] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2K1ZQG8 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_007G069500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology