Basic Information
Locus ID:
populus_peu26318
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Short Name:
UBP5
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr16 | 20385447 | 20395270 | + | populus_peu26318 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.70 | 107,934.75 Da | 50.47 | 83.63 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 783 | 936 | 2.61519E-58 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 334 | 935 | 1.0E-85 | IPR001394 |
| Pfam | PF06337 | DUSP domain | 40 | 144 | 2.9E-24 | IPR006615 |
| SUPERFAMILY | SSF143791 | DUSP-like | 18 | 144 | 1.03E-27 | IPR035927 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 332 | 937 | 3.34E-108 | IPR038765 |
| Gene3D | G3DSA:3.30.2230.10 | - | 8 | 157 | 6.1E-37 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 319 | 533 | 3.5E-67 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 651 | 943 | 5.9E-56 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 158 | 244 | 6.7E-12 | - |
| SMART | SM00695 | dusp | 36 | 147 | 1.4E-32 | IPR006615 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 334 | 938 | 56.482952 | IPR028889 |
| ProSiteProfiles | PS51283 | DUSP domain profile. | 17 | 144 | 18.632954 | IPR006615 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 880 | 897 | - | IPR018200 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 335 | 350 | - | IPR018200 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G40930.1 | ubiquitin-specific protease 5. Encodes ubiquitin-specific protease with nuclear localization signals that is likely to be involved in ubiquitin-mediated protein degradation. | 0 |
| RefSeq | XP_011041383.1 | PREDICTED: ubiquitin carboxyl-terminal hydrolase 5 isoform X2 [Populus euphratica] | 0 |
| O22207 | Ubiquitin carboxyl-terminal hydrolase 5 OS=Arabidopsis thaliana OX=3702 GN=UBP5 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8T2WY91 | Ubiquitin carboxyl-terminal hydrolase OS=Populus deltoides OX=3696 GN=H0E87_027331 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology