halophFGD

Basic Information

Locus ID: populus_peu26197

Species & Taxonomic ID: Populus euphratica & 75702

Genome Assembly: GWHAAYU00000000

Description: C1 domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr16	19303273	19305667	-	populus_peu26197

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.08	85,575.18 Da	55.54	72.17	-0.32

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF03107	C1 domain	692	736	6.1E-7	IPR004146
Pfam	PF03107	C1 domain	443	487	1.7E-9	IPR004146
Pfam	PF03107	C1 domain	51	100	5.8E-8	IPR004146
Pfam	PF03107	C1 domain	110	157	3.6E-6	IPR004146
Pfam	PF03107	C1 domain	230	273	7.7E-6	IPR004146
Pfam	PF03107	C1 domain	174	220	3.5E-10	IPR004146
Pfam	PF03107	C1 domain	297	331	1.2E-6	IPR004146
Pfam	PF03107	C1 domain	630	676	5.7E-7	IPR004146
Pfam	PF03107	C1 domain	342	392	2.6E-6	IPR004146
SUPERFAMILY	SSF57889	Cysteine-rich domain	599	685	5.23E-19	-
SUPERFAMILY	SSF57889	Cysteine-rich domain	689	737	2.62E-5	-
SUPERFAMILY	SSF57889	Cysteine-rich domain	344	392	9.07E-5	-
SUPERFAMILY	SSF57889	Cysteine-rich domain	438	499	1.67E-11	-
SUPERFAMILY	SSF57889	Cysteine-rich domain	77	163	3.4E-18	-
SUPERFAMILY	SSF57889	Cysteine-rich domain	197	279	9.27E-21	-
SUPERFAMILY	SSF57889	Cysteine-rich domain	296	344	1.2E-8	-
Gene3D	G3DSA:3.30.60.20	-	188	222	1.9E-5	-
SMART	SM00249	PHD_3	647	716	25.0	IPR001965
SMART	SM00109	c1_12	504	547	0.37	IPR002219
SMART	SM00109	c1_12	56	105	0.83	IPR002219
SMART	SM00109	c1_12	285	336	0.55	IPR002219
SMART	SM00109	c1_12	170	225	0.51	IPR002219
SMART	SM00109	c1_12	349	397	1.1	IPR002219
SMART	SM00249	PHD_3	304	384	2.9	IPR001965
SMART	SM00109	c1_12	227	277	0.49	IPR002219
SMART	SM00249	PHD_3	193	250	0.49	IPR001965

Gene Ontology

Biological Process:

GO:0035556 (intracellular signal transduction)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G22355.1	Cysteine/Histidine-rich C1 domain family protein.
RefSeq	XP_011033196.1	PREDICTED: uncharacterized protein LOC105131758 isoform X3 [Populus euphratica]
TrEMBL	A0A2K1R6F3	Phorbol-ester/DAG-type domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_T110500 PE=4 SV=2

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	6	jg35663, jg8188, jg8412, jg8450, jg8451, jg8457
Apiaceae	Apium graveolens	5	Ag10G00884, Ag1G00153, Ag1G00315, Ag8G00374, Ag8G01874
Asteraceae	Flaveria trinervia	12	Ftri10G04197, Ftri15G15158, Ftri15G19898, Ftri1G06516 ... Ftri1G15699, Ftri1G31999, Ftri3G08687, Ftri3G10138, Ftri6G30596, Ftri8G05177, Ftri8G13431, Ftri8G27137
Brassicaceae	Arabidopsis thaliana	35	AT1G58037.1, AT2G04680.1, AT2G19650.1, AT2G19660.1 ... AT2G43220.1, AT3G06990.1, AT3G07000.1, AT3G45840.1, AT3G46800.1, AT3G46810.1, AT3G48400.1, AT4G01350.1, AT4G01740.1, AT4G01760.1, AT4G01910.1, AT4G01920.1, AT4G01925.1, AT4G01930.1, AT4G02180.1, AT4G02190.1, AT4G09690.1, AT4G11390.1, AT4G11540.1, AT4G11550.1, AT4G13992.1, AT4G16015.1, AT5G16430.1, AT5G22355.1, AT5G26190.1, AT5G37620.1, AT5G40320.1, AT5G45730.1, AT5G59920.1, AT5G59930.1, AT5G59940.1
Brassicaceae	Eutrema salsugineum	34	Thhalv10001923m.g.v1.0, Thhalv10002199m.g.v1.0 ... Thhalv10002432m.g.v1.0, Thhalv10003740m.g.v1.0, Thhalv10003743m.g.v1.0, Thhalv10003754m.g.v1.0, Thhalv10003760m.g.v1.0, Thhalv10003761m.g.v1.0, Thhalv10005293m.g.v1.0, Thhalv10005296m.g.v1.0, Thhalv10005411m.g.v1.0, Thhalv10007210m.g.v1.0, Thhalv10009528m.g.v1.0, Thhalv10009889m.g.v1.0, Thhalv10012095m.g.v1.0, Thhalv10012175m.g.v1.0, Thhalv10012196m.g.v1.0, Thhalv10012912m.g.v1.0, Thhalv10012915m.g.v1.0, Thhalv10016311m.g.v1.0, Thhalv10022573m.g.v1.0, Thhalv10023179m.g.v1.0, Thhalv10024646m.g.v1.0, Thhalv10027008m.g.v1.0, Thhalv10027103m.g.v1.0, Thhalv10027671m.g.v1.0, Thhalv10028079m.g.v1.0, Thhalv10028133m.g.v1.0, Thhalv10028236m.g.v1.0, Thhalv10028242m.g.v1.0, Thhalv10028254m.g.v1.0, Thhalv10028534m.g.v1.0, Thhalv10029207m.g.v1.0, Thhalv10029489m.g.v1.0
Brassicaceae	Schrenkiella parvula	5	Sp2g06340.v2.2, Sp5g15690.v2.2, Sp7g01400.v2.2 ... Sp7g01410.v2.2, Sp7g16340.v2.2
Brassicaceae	Brassica nigra	39	BniB01g002950.2N, BniB01g004980.2N, BniB01g026110.2N ... BniB01g026650.2N, BniB01g058940.2N, BniB01g058950.2N, BniB01g058960.2N, BniB01g058970.2N, BniB02g015730.2N, BniB02g039660.2N, BniB02g042710.2N, BniB02g050650.2N, BniB02g051320.2N, BniB02g067650.2N, BniB02g067710.2N, BniB03g040730.2N, BniB04g024850.2N, BniB04g024860.2N, BniB05g007940.2N, BniB05g017310.2N, BniB05g018620.2N, BniB05g020320.2N, BniB06g008470.2N, BniB06g023060.2N, BniB07g033480.2N, BniB07g033740.2N, BniB07g058140.2N, BniB07g060150.2N, BniB07g062010.2N, BniB07g062030.2N, BniB08g009490.2N, BniB08g012030.2N, BniB08g012050.2N, BniB08g022020.2N, BniB08g038300.2N, BniB08g044670.2N, BniB08g044680.2N, BniB08g044720.2N, BniB08g045080.2N
Casuarinaceae	Casuarina equisetifolia	17	Ceq01G2298, Ceq02G1953, Ceq03G0083, Ceq03G0113, Ceq03G0190 ... Ceq04G0075, Ceq04G0556, Ceq04G2464, Ceq04G2468, Ceq05G2487, Ceq05G2489, Ceq06G0228, Ceq07G2160, Ceq07G2257, Ceq08G0108, Ceq08G0138, Ceq09G0291
Casuarinaceae	Casuarina glauca	23	Cgl01G2601, Cgl01G2602, Cgl01G2604, Cgl03G0217, Cgl03G0218 ... Cgl04G0632, Cgl04G0634, Cgl04G0672, Cgl04G2695, Cgl05G2333, Cgl05G2698, Cgl07G1743, Cgl07G2340, Cgl07G2349, Cgl07G2372, Cgl07G2373, Cgl07G2522, Cgl08G0162, Cgl08G0163, Cgl08G0167, Cgl08G2652, Cgl09G0326, Cgl09G0327
Malvaceae	Hibiscus hamabo Siebold & Zucc.	6	nbisL1-mrna-3679, nbisL1-mrna-5622, nbisL1-mrna-8116 ... nbisL1-mrna-8118, nbisL1-mrna-8119, nbisL1-mrna-8190
Plumbaginaceae	Limonium bicolor	1	Lb3G17998
Rhizophoraceae	Carallia pectinifolia	1	nbisL1-mrna-17876
Salicaceae	Populus euphratica	4	populus_peu26078, populus_peu26197, populus_peu26198 ... populus_peu26199