Basic Information
Locus ID:
populus_peu26134
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr16 | 18786497 | 18795454 | - | populus_peu26134 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.39 | 86,539.75 Da | 47.08 | 71.12 | -0.69 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08215 | STKc_Nek | 196 | 451 | 3.02683E-134 | - |
| Pfam | PF00069 | Protein kinase domain | 197 | 450 | 4.0E-66 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 194 | 478 | 3.1E-84 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 180 | 276 | 6.3E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 277 | 465 | 8.6E-58 | - |
| SMART | SM00220 | serkin_6 | 197 | 451 | 5.2E-88 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 197 | 451 | 46.548222 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 318 | 330 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 203 | 226 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 630 | 679 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 93 | 107 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 475 | 521 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 475 | 602 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 522 | 602 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 93 | 138 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 51 | 67 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 44 | 67 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20860.1 | NIMA-related kinase 5. Encodes a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. | 0 |
| RefSeq | XP_011033286.1 | PREDICTED: serine/threonine-protein kinase Nek6-like isoform X1 [Populus euphratica] | 0 |
| Q9LT35 | Serine/threonine-protein kinase Nek6 OS=Arabidopsis thaliana OX=3702 GN=NEK6 PE=3 SV=1 | 0 | |
| TrEMBL | A0A8T2WYT8 | Protein kinase domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_027161 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology