Basic Information
Locus ID:
populus_peu25772
Species & Taxonomic ID:
Populus euphratica & 75702
Genome Assembly:
GWHAAYU00000000
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr16 | 13449290 | 13451439 | + | populus_peu25772 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.64 | 74,545.07 Da | 36.55 | 92.52 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 364 | 631 | 2.40262E-93 | - |
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 49 | 264 | 2.39608E-73 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 34 | 271 | 5.4E-61 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 359 | 629 | 1.7E-50 | IPR000719 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 30 | 279 | 6.06E-64 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 340 | 664 | 1.16E-81 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 434 | 637 | 2.4E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 320 | 433 | 1.4E-31 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 30 | 274 | 4.0E-65 | - |
| SMART | SM00220 | serkin_6 | 358 | 631 | 2.3E-39 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 358 | 640 | 38.831059 | IPR000719 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 147 | 153 | - | IPR019825 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 364 | 387 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 477 | 489 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53380.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_011004619.1 | PREDICTED: L-type lectin-domain containing receptor kinase VIII.1-like [Populus euphratica] | 0 |
| Q9LFH9 | L-type lectin-domain containing receptor kinase VIII.1 OS=Arabidopsis thaliana OX=3702 GN=LECRK81 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X8C1H6 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_051728 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology